Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 TOB2P1-201ENST00000469761 992 ntBASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 AC010240.3-201ENST00000607688 395 ntBASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 DRAXINP1-201ENST00000437611 948 ntBASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 FOSL1P1-201ENST00000511041 816 ntBASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 AC104692.2-201ENST00000603054 253 ntBASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHAC2Q9Y5I4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 AC104390.1-201ENST00000555663 520 ntBASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHAC2Q9Y5I4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDHAC2Q9Y5I4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHAC2Q9Y5I4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
PCDHAC2Q9Y5I4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHAC2Q9Y5I4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHAC2Q9Y5I4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHAC2Q9Y5I4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHAC2Q9Y5I4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHAC2Q9Y5I4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHAC2Q9Y5I4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHAC2Q9Y5I4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PCDHAC2Q9Y5I4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHAC2Q9Y5I4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PCDHAC2Q9Y5I4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHAC2Q9Y5I4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHAC2Q9Y5I4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHAC2Q9Y5I4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHAC2Q9Y5I4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHAC2Q9Y5I4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms