Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 AL512604.3-201ENST00000569583 964 ntBASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA6Q9Y5G7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 AC138932.1-201ENST00000534164 6830 ntBASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 RNF152P1-201ENST00000397754 604 ntBASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 LINC01465-201ENST00000408887 1940 ntBASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGA6Q9Y5G7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDHGA6Q9Y5G7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
PCDHGA6Q9Y5G7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDHGA6Q9Y5G7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 AL353719.1-201ENST00000566847 864 ntBASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 MYC-208ENST00000641036 567 ntBASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA6Q9Y5G7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 COX11P1-201ENST00000489116 835 ntBASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 AL138781.2-201ENST00000617896 1843 ntBASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA6Q9Y5G7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms