Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 CYP2D8P-201ENST00000433633 1490 ntBASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 ATP5G1P1-201ENST00000448724 379 ntBASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 AC010947.1-201ENST00000623454 693 ntBASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 RCC2P6-201ENST00000526625 1557 ntBASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB3Q9Y5E6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHB3Q9Y5E6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 KRT18P57-201ENST00000443599 1254 ntBASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 SLC25A3P1-201ENST00000443844 931 ntBASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB3Q9Y5E6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 TERF1P1-201ENST00000311003 1181 ntBASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 AC004951.3-201ENST00000418645 1148 ntBASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 AC097488.1-201ENST00000507834 756 ntBASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 AP000692.2-201ENST00000608391 879 ntBASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 AC005082.1-201ENST00000413042 2259 ntBASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB3Q9Y5E6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 AC128688.1-201ENST00000487626 519 ntBASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 AC011298.2-201ENST00000617989 482 ntBASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB3Q9Y5E6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms