Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 NTF6G-201ENST00000591094 616 ntBASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 AC011676.5-201ENST00000624864 2660 ntBASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRCH1Q9Y2L9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms