Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SHROOM4Q9ULL8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC35.8■■■■□ 3.32
SHROOM4Q9ULL8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC35.8■■■■□ 3.32
SHROOM4Q9ULL8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC35.8■■■■□ 3.32
SHROOM4Q9ULL8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 AC036111.1-201ENST00000533973 1582 ntBASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
SHROOM4Q9ULL8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 GAS2L1P1-201ENST00000420145 1480 ntBASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
SHROOM4Q9ULL8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 AKR1C7P-201ENST00000305623 895 ntBASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 AC092183.1-201ENST00000469884 875 ntBASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC35.77■■■■□ 3.32
SHROOM4Q9ULL8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 KRT16P4-201ENST00000453883 522 ntBASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC35.76■■■■□ 3.32
SHROOM4Q9ULL8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC35.76■■■■□ 3.31
SHROOM4Q9ULL8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
SHROOM4Q9ULL8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 AL158211.5-201ENST00000623583 2518 ntBASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC35.75■■■■□ 3.31
SHROOM4Q9ULL8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC35.74■■■■□ 3.31
SHROOM4Q9ULL8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC35.73■■■■□ 3.31
SHROOM4Q9ULL8 TOB2P1-201ENST00000469761 992 ntBASIC35.73■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms