Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 PHGDH-210ENST00000641115 1638 ntBASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAP1Q9NZP6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.14■□□□□ 0.34
NPAP1Q9NZP6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NPAP1Q9NZP6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NPAP1Q9NZP6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 AP006587.1-201ENST00000534129 1502 ntBASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 AL691432.2-201ENST00000607222 2038 ntBASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPAP1Q9NZP6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAP1Q9NZP6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms