Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 AC098818.2-201ENST00000564925 2320 ntBASIC21.66■■□□□ 1.06
RNF216Q9NWF9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 SMG8-203ENST00000578922 2178 ntBASIC21.66■■□□□ 1.06
RNF216Q9NWF9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 FAM197Y1-201ENST00000421178 764 ntBASIC21.66■■□□□ 1.06
RNF216Q9NWF9 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 NUDT16P1-203ENST00000513809 620 ntBASIC21.66■■□□□ 1.06
RNF216Q9NWF9 KRT18P21-201ENST00000515767 1272 ntBASIC21.66■■□□□ 1.06
RNF216Q9NWF9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 AC079598.2-201ENST00000599191 1294 ntBASIC21.66■■□□□ 1.06
RNF216Q9NWF9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF216Q9NWF9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 UNC93B2-201ENST00000285383 730 ntBASIC21.65■■□□□ 1.06
RNF216Q9NWF9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 AC007618.1-201ENST00000366455 732 ntBASIC21.65■■□□□ 1.06
RNF216Q9NWF9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 KSR1P1-201ENST00000446298 240 ntBASIC21.65■■□□□ 1.06
RNF216Q9NWF9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 AC010331.1-201ENST00000611423 582 ntBASIC21.65■■□□□ 1.06
RNF216Q9NWF9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF216Q9NWF9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
RNF216Q9NWF9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RNF216Q9NWF9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RNF216Q9NWF9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.64■■□□□ 1.06
RNF216Q9NWF9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RNF216Q9NWF9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF216Q9NWF9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
RNF216Q9NWF9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.64■■□□□ 1.06
RNF216Q9NWF9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 RN7SL850P-201ENST00000579959 291 ntBASIC21.64■■□□□ 1.05
RNF216Q9NWF9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 AC013731.1-201ENST00000604340 883 ntBASIC21.64■■□□□ 1.05
RNF216Q9NWF9 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 AL392048.1-201ENST00000613946 534 ntBASIC21.64■■□□□ 1.05
RNF216Q9NWF9 AL512324.3-201ENST00000619383 882 ntBASIC21.64■■□□□ 1.05
RNF216Q9NWF9 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF216Q9NWF9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms