Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 AC233263.1-201ENST00000578059 224 ntBASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 FEM1AP3-201ENST00000403722 1741 ntBASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LIN7CQ9NUP9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 AC007613.1-201ENST00000572811 2597 ntBASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 PRORSD1P-201ENST00000295112 541 ntBASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 C1QBPP2-201ENST00000528754 825 ntBASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 AC083906.6-201ENST00000641366 219 ntBASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.67■□□□□ 0.1
LIN7CQ9NUP9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms