Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRMT13Q9NUP7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 AL512353.2-201ENST00000448759 1962 ntBASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 AC104390.1-201ENST00000555663 520 ntBASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 AC012615.1-201ENST00000565797 1299 ntBASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 AC005332.3-201ENST00000589904 676 ntBASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRMT13Q9NUP7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 AL160237.2-201ENST00000556165 472 ntBASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRMT13Q9NUP7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
TRMT13Q9NUP7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
TRMT13Q9NUP7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRMT13Q9NUP7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRMT13Q9NUP7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 TEX21P-204ENST00000641479 1693 ntBASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRMT13Q9NUP7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRMT13Q9NUP7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.63■□□□□ 0.89
TRMT13Q9NUP7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRMT13Q9NUP7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms