Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 AC105020.1-201ENST00000435356 2205 ntBASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 AL162741.1-201ENST00000565563 1558 ntBASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 SLC25A6P5-201ENST00000435663 894 ntBASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 REXO1L9P-201ENST00000604264 2108 ntBASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
CDC42SE1Q9NRR8 DKFZP434A062-201ENST00000573103 5021 ntBASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
CDC42SE1Q9NRR8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms