Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 HCG4P8-203ENST00000443049 980 ntBASIC19.5■□□□□ 0.71
HPS4Q9NQG7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.5■□□□□ 0.71
HPS4Q9NQG7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.49■□□□□ 0.71
HPS4Q9NQG7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HPS4Q9NQG7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.48■□□□□ 0.71
HPS4Q9NQG7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.47■□□□□ 0.71
HPS4Q9NQG7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 HBZP1-201ENST00000354915 429 ntBASIC19.47■□□□□ 0.71
HPS4Q9NQG7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
HPS4Q9NQG7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS4Q9NQG7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms