Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 KRT16P3-201ENST00000439127 1283 ntBASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 IGHV3-19-201ENST00000521488 291 ntBASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VCX3AQ9NNX9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 NKILA-202ENST00000614771 2598 ntBASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 BX842568.3-201ENST00000418104 571 ntBASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 AC135776.1-201ENST00000319817 2481 ntBASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3AQ9NNX9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 AL162741.1-201ENST00000565563 1558 ntBASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.6■□□□□ 0.41
VCX3AQ9NNX9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms