Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 AP003041.3-201ENST00000527151 707 ntBASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RPAP1Q9BWH6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 AC009947.2-201ENST00000444014 672 ntBASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 AL441883.1-201ENST00000566170 1045 ntBASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.89■■□□□ 1.25
RPAP1Q9BWH6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 KRT8P11-201ENST00000409686 1436 ntBASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPAP1Q9BWH6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 TSPY23P-201ENST00000440136 739 ntBASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 FAM86EP-206ENST00000510506 987 ntBASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 AL023973.1-201ENST00000624619 620 ntBASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPAP1Q9BWH6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RPAP1Q9BWH6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RPAP1Q9BWH6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.86■■□□□ 1.25
RPAP1Q9BWH6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
RPAP1Q9BWH6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.86■■□□□ 1.25
RPAP1Q9BWH6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RPAP1Q9BWH6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.86■■□□□ 1.25
RPAP1Q9BWH6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RPAP1Q9BWH6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.86■■□□□ 1.25
RPAP1Q9BWH6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms