Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 AC139713.2-201ENST00000641328 2723 ntBASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 KRT16P6-202ENST00000425692 1426 ntBASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 AP006587.1-201ENST00000534129 1502 ntBASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF4Q9BUZ4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 RCN1P1-201ENST00000400413 996 ntBASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 AP000525.1-201ENST00000608286 694 ntBASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 KRT16P1-201ENST00000399124 1418 ntBASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 AC116351.2-201ENST00000606540 1585 ntBASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF4Q9BUZ4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 AC116562.2-201ENST00000507042 360 ntBASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAF4Q9BUZ4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 C1QL1P1-201ENST00000568105 661 ntBASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms