Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.95■□□□□ 0.78
CALR3Q96L12 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CALR3Q96L12 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.95■□□□□ 0.78
CALR3Q96L12 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 AC018470.1-201ENST00000624790 3129 ntBASIC19.95■□□□□ 0.78
CALR3Q96L12 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CALR3Q96L12 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CALR3Q96L12 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CALR3Q96L12 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.94■□□□□ 0.78
CALR3Q96L12 AL133373.2-201ENST00000623187 2828 ntBASIC19.94■□□□□ 0.78
CALR3Q96L12 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CALR3Q96L12 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CALR3Q96L12 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.94■□□□□ 0.78
CALR3Q96L12 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.94■□□□□ 0.78
CALR3Q96L12 KRT16P5-201ENST00000455284 522 ntBASIC19.94■□□□□ 0.78
CALR3Q96L12 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.94■□□□□ 0.78
CALR3Q96L12 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.94■□□□□ 0.78
CALR3Q96L12 AC008403.3-201ENST00000598924 454 ntBASIC19.94■□□□□ 0.78
CALR3Q96L12 AC068587.9-201ENST00000641814 219 ntBASIC19.94■□□□□ 0.78
CALR3Q96L12 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.94■□□□□ 0.78
CALR3Q96L12 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CALR3Q96L12 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.93■□□□□ 0.78
CALR3Q96L12 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CALR3Q96L12 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.93■□□□□ 0.78
CALR3Q96L12 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CALR3Q96L12 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.93■□□□□ 0.78
CALR3Q96L12 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.93■□□□□ 0.78
CALR3Q96L12 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
CALR3Q96L12 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.93■□□□□ 0.78
CALR3Q96L12 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.93■□□□□ 0.78
CALR3Q96L12 AC104771.1-201ENST00000603335 964 ntBASIC19.93■□□□□ 0.78
CALR3Q96L12 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
CALR3Q96L12 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CALR3Q96L12 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 ABALON-201ENST00000629058 1903 ntBASIC19.93■□□□□ 0.78
CALR3Q96L12 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.93■□□□□ 0.78
CALR3Q96L12 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.93■□□□□ 0.78
CALR3Q96L12 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.93■□□□□ 0.78
CALR3Q96L12 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CALR3Q96L12 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.93■□□□□ 0.78
CALR3Q96L12 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.93■□□□□ 0.78
CALR3Q96L12 AC011270.2-201ENST00000624293 2550 ntBASIC19.92■□□□□ 0.78
CALR3Q96L12 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.92■□□□□ 0.78
CALR3Q96L12 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CALR3Q96L12 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.92■□□□□ 0.78
CALR3Q96L12 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALR3Q96L12 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALR3Q96L12 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CALR3Q96L12 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CALR3Q96L12 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALR3Q96L12 Z85996.1-201ENST00000494644 937 ntBASIC19.92■□□□□ 0.78
CALR3Q96L12 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.92■□□□□ 0.78
CALR3Q96L12 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.92■□□□□ 0.78
CALR3Q96L12 AL445675.2-201ENST00000620291 557 ntBASIC19.92■□□□□ 0.78
CALR3Q96L12 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.92■□□□□ 0.78
CALR3Q96L12 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.92■□□□□ 0.78
CALR3Q96L12 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CALR3Q96L12 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALR3Q96L12 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.92■□□□□ 0.78
CALR3Q96L12 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALR3Q96L12 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALR3Q96L12 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.92■□□□□ 0.78
CALR3Q96L12 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.92■□□□□ 0.78
CALR3Q96L12 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CALR3Q96L12 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.92■□□□□ 0.78
CALR3Q96L12 KRT8P3-201ENST00000519669 1449 ntBASIC19.92■□□□□ 0.78
CALR3Q96L12 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALR3Q96L12 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CALR3Q96L12 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CALR3Q96L12 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.92■□□□□ 0.78
CALR3Q96L12 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CALR3Q96L12 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms