Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTHRC1Q96CG8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTHRC1Q96CG8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 MIR564-202ENST00000385049 94 ntBASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 WWOX-216ENST00000569818 525 ntBASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 MIR3180-5-201ENST00000583743 153 ntBASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTHRC1Q96CG8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 KRT18P41-201ENST00000518924 1277 ntBASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 AC145285.6-201ENST00000604632 637 ntBASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 FAM87A-204ENST00000613235 858 ntBASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 AL020996.1-203ENST00000536896 2307 ntBASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTHRC1Q96CG8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTHRC1Q96CG8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTHRC1Q96CG8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTHRC1Q96CG8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms