Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 AP001412.1-201ENST00000608405 714 ntBASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 AL049637.2-201ENST00000641778 930 ntBASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 AC068587.9-201ENST00000641814 219 ntBASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RHBDF1Q96CC6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RHBDF1Q96CC6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 Z99916.2-201ENST00000604037 246 ntBASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 AIRN-201ENST00000601203 4374 ntBASIC18.35■□□□□ 0.53
RHBDF1Q96CC6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 MTMR9LP-203ENST00000426597 1545 ntBASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 AC096733.2-201ENST00000609937 1394 ntBASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 AC104581.1-202ENST00000635932 2618 ntBASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 DGCR10-201ENST00000609839 495 ntBASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDF1Q96CC6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 466 ms