Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6V0A1Q93050 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 GPAT2P1-201ENST00000444924 1672 ntBASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V0A1Q93050 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 AC005332.1-201ENST00000577698 1310 ntBASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 AL023284.2-201ENST00000405850 579 ntBASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 GCSHP2-201ENST00000560971 527 ntBASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V0A1Q93050 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 MCCD1P1-208ENST00000445732 328 ntBASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 AC112907.2-201ENST00000448639 330 ntBASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 KRT18P56-201ENST00000507275 550 ntBASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.08■□□□□ 0.97
ATP6V0A1Q93050 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6V0A1Q93050 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.96
ATP6V0A1Q93050 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
ATP6V0A1Q93050 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6V0A1Q93050 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6V0A1Q93050 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6V0A1Q93050 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 CR769767.2-201ENST00000622735 460 ntBASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 AC093458.2-201ENST00000623150 629 ntBASIC21.07■□□□□ 0.96
ATP6V0A1Q93050 AC116407.4-201ENST00000623319 1061 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms