Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 CA15P1-201ENST00000481698 905 ntBASIC17.79■□□□□ 0.44
TM9SF4Q92544 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 AC026471.1-201ENST00000564629 3026 ntBASIC17.79■□□□□ 0.44
TM9SF4Q92544 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.79■□□□□ 0.44
TM9SF4Q92544 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM9SF4Q92544 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 FAM8A6P-201ENST00000407496 1135 ntBASIC17.78■□□□□ 0.44
TM9SF4Q92544 AC117947.1-201ENST00000427448 529 ntBASIC17.78■□□□□ 0.44
TM9SF4Q92544 AC007663.1-201ENST00000438948 1240 ntBASIC17.78■□□□□ 0.44
TM9SF4Q92544 AC008040.2-201ENST00000461049 708 ntBASIC17.78■□□□□ 0.44
TM9SF4Q92544 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TM9SF4Q92544 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.78■□□□□ 0.44
TM9SF4Q92544 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 INGX-201ENST00000359239 846 ntBASIC17.77■□□□□ 0.44
TM9SF4Q92544 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 Z85996.1-201ENST00000494644 937 ntBASIC17.77■□□□□ 0.44
TM9SF4Q92544 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 AL138966.2-201ENST00000621997 464 ntBASIC17.77■□□□□ 0.44
TM9SF4Q92544 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TM9SF4Q92544 AC092338.2-201ENST00000568827 1415 ntBASIC17.77■□□□□ 0.44
TM9SF4Q92544 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.77■□□□□ 0.44
TM9SF4Q92544 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM9SF4Q92544 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TM9SF4Q92544 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TM9SF4Q92544 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.76■□□□□ 0.43
TM9SF4Q92544 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 AC138932.1-201ENST00000534164 6830 ntBASIC17.76■□□□□ 0.43
TM9SF4Q92544 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.76■□□□□ 0.43
TM9SF4Q92544 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.76■□□□□ 0.43
TM9SF4Q92544 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms