Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.12■□□□□ 0.81
SHC3Q92529 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SHC3Q92529 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.12■□□□□ 0.81
SHC3Q92529 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHC3Q92529 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.12■□□□□ 0.81
SHC3Q92529 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHC3Q92529 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHC3Q92529 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.12■□□□□ 0.81
SHC3Q92529 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHC3Q92529 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.12■□□□□ 0.81
SHC3Q92529 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHC3Q92529 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.11■□□□□ 0.81
SHC3Q92529 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SHC3Q92529 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.11■□□□□ 0.81
SHC3Q92529 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.11■□□□□ 0.81
SHC3Q92529 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SHC3Q92529 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SHC3Q92529 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.11■□□□□ 0.81
SHC3Q92529 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.11■□□□□ 0.81
SHC3Q92529 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SHC3Q92529 CRYGFP-201ENST00000418459 633 ntBASIC20.11■□□□□ 0.81
SHC3Q92529 RBM17P1-201ENST00000453646 1190 ntBASIC20.11■□□□□ 0.81
SHC3Q92529 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.11■□□□□ 0.81
SHC3Q92529 MIR4785-201ENST00000585005 73 ntBASIC20.11■□□□□ 0.81
SHC3Q92529 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SHC3Q92529 AP006294.2-201ENST00000641667 209 ntBASIC20.11■□□□□ 0.81
SHC3Q92529 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SHC3Q92529 AC005082.1-201ENST00000413042 2259 ntBASIC20.11■□□□□ 0.81
SHC3Q92529 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 AC104581.1-202ENST00000635932 2618 ntBASIC20.11■□□□□ 0.81
SHC3Q92529 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC3Q92529 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SHC3Q92529 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.1■□□□□ 0.81
SHC3Q92529 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.1■□□□□ 0.81
SHC3Q92529 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
SHC3Q92529 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SHC3Q92529 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SHC3Q92529 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.1■□□□□ 0.81
SHC3Q92529 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.1■□□□□ 0.81
SHC3Q92529 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.1■□□□□ 0.81
SHC3Q92529 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.1■□□□□ 0.81
SHC3Q92529 AL357033.4-201ENST00000617703 1807 ntBASIC20.1■□□□□ 0.81
SHC3Q92529 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SHC3Q92529 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.1■□□□□ 0.81
SHC3Q92529 AL109659.2-201ENST00000606809 1674 ntBASIC20.1■□□□□ 0.81
SHC3Q92529 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SHC3Q92529 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.1■□□□□ 0.81
SHC3Q92529 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.1■□□□□ 0.81
SHC3Q92529 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC3Q92529 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SHC3Q92529 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC3Q92529 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC3Q92529 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SHC3Q92529 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.09■□□□□ 0.81
SHC3Q92529 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC3Q92529 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SHC3Q92529 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.09■□□□□ 0.81
SHC3Q92529 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHC3Q92529 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.09■□□□□ 0.81
SHC3Q92529 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SHC3Q92529 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHC3Q92529 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms