Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGB4Q8WW32 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 AP002383.4-201ENST00000442518 975 ntBASIC18.88■□□□□ 0.61
HMGB4Q8WW32 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 KRT8P26-201ENST00000534154 1276 ntBASIC18.88■□□□□ 0.61
HMGB4Q8WW32 AL136038.4-201ENST00000603606 1261 ntBASIC18.88■□□□□ 0.61
HMGB4Q8WW32 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGB4Q8WW32 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 HLA-F-220ENST00000434407 884 ntBASIC18.87■□□□□ 0.61
HMGB4Q8WW32 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 AC111152.3-201ENST00000569699 673 ntBASIC18.87■□□□□ 0.61
HMGB4Q8WW32 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 MIR3917-201ENST00000580971 93 ntBASIC18.87■□□□□ 0.61
HMGB4Q8WW32 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HMGB4Q8WW32 AL391807.1-203ENST00000604392 2365 ntBASIC18.86■□□□□ 0.61
HMGB4Q8WW32 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 AL845331.1-201ENST00000424978 1190 ntBASIC18.86■□□□□ 0.61
HMGB4Q8WW32 AC246785.2-201ENST00000432512 513 ntBASIC18.86■□□□□ 0.61
HMGB4Q8WW32 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.86■□□□□ 0.61
HMGB4Q8WW32 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGB4Q8WW32 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGB4Q8WW32 AC093525.10-201ENST00000625130 1569 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms