Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 AC090192.1-201ENST00000517740 490 ntBASIC28.15■■■□□ 2.1
CCER1Q8TC90 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCER1Q8TC90 AC233263.1-201ENST00000578059 224 ntBASIC28.15■■■□□ 2.1
CCER1Q8TC90 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC28.15■■■□□ 2.1
CCER1Q8TC90 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC28.15■■■□□ 2.1
CCER1Q8TC90 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCER1Q8TC90 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC28.15■■■□□ 2.1
CCER1Q8TC90 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CCER1Q8TC90 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCER1Q8TC90 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCER1Q8TC90 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC28.15■■■□□ 2.1
CCER1Q8TC90 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCER1Q8TC90 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CCER1Q8TC90 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CCER1Q8TC90 AC079598.2-202ENST00000546624 1451 ntBASIC28.15■■■□□ 2.1
CCER1Q8TC90 PXK-206ENST00000463280 2825 ntTSL 2 BASIC28.14■■■□□ 2.1
CCER1Q8TC90 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC28.14■■■□□ 2.1
CCER1Q8TC90 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCER1Q8TC90 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC28.14■■■□□ 2.1
CCER1Q8TC90 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC28.14■■■□□ 2.1
CCER1Q8TC90 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC28.14■■■□□ 2.1
CCER1Q8TC90 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCER1Q8TC90 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CCER1Q8TC90 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC28.14■■■□□ 2.1
CCER1Q8TC90 AC004264.1-201ENST00000608354 794 ntBASIC28.14■■■□□ 2.1
CCER1Q8TC90 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CCER1Q8TC90 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCER1Q8TC90 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCER1Q8TC90 MADD-208ENST00000405573 1823 ntTSL 5 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCER1Q8TC90 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 GAS7-202ENST00000396115 929 ntTSL 5 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCER1Q8TC90 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCER1Q8TC90 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 MTDHP1-201ENST00000605323 784 ntBASIC28.13■■■□□ 2.09
CCER1Q8TC90 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCER1Q8TC90 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCER1Q8TC90 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
CCER1Q8TC90 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCER1Q8TC90 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCER1Q8TC90 CD276-201ENST00000318424 2738 ntTSL 5 BASIC28.12■■■□□ 2.09
CCER1Q8TC90 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCER1Q8TC90 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCER1Q8TC90 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCER1Q8TC90 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCER1Q8TC90 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CCER1Q8TC90 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCER1Q8TC90 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCER1Q8TC90 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC28.11■■■□□ 2.09
CCER1Q8TC90 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CCER1Q8TC90 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CCER1Q8TC90 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CCER1Q8TC90 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
CCER1Q8TC90 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC28.1■■■□□ 2.09
CCER1Q8TC90 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC28.1■■■□□ 2.09
CCER1Q8TC90 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.1■■■□□ 2.09
CCER1Q8TC90 AP003097.1-201ENST00000530657 1135 ntBASIC28.1■■■□□ 2.09
CCER1Q8TC90 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC28.1■■■□□ 2.09
CCER1Q8TC90 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CCER1Q8TC90 AC069544.1-201ENST00000609399 999 ntBASIC28.1■■■□□ 2.09
CCER1Q8TC90 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms