Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 AC005829.2-201ENST00000571422 1056 ntBASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 AC011767.1-201ENST00000617410 1153 ntBASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 AC016769.1-201ENST00000409132 1010 ntBASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 LSM12P1-201ENST00000411836 588 ntBASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 AC007322.1-201ENST00000426983 750 ntBASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB3IL1Q8TBN0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB3IL1Q8TBN0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 AP006587.1-201ENST00000534129 1502 ntBASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 AP000997.3-201ENST00000623333 2250 ntBASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IL1Q8TBN0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 AC006015.1-201ENST00000429970 570 ntBASIC18.78■□□□□ 0.6
RAB3IL1Q8TBN0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms