Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.66■□□□□ 0.42
NUP43Q8NFH3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 NUDT16P1-203ENST00000513809 620 ntBASIC17.65■□□□□ 0.42
NUP43Q8NFH3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 AC233702.5-201ENST00000584107 538 ntBASIC17.65■□□□□ 0.42
NUP43Q8NFH3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 AC113410.3-201ENST00000623366 203 ntBASIC17.65■□□□□ 0.42
NUP43Q8NFH3 TMEM191A-211ENST00000637163 1067 ntBASIC17.65■□□□□ 0.42
NUP43Q8NFH3 AL049637.2-201ENST00000641778 930 ntBASIC17.65■□□□□ 0.42
NUP43Q8NFH3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NUP43Q8NFH3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NUP43Q8NFH3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.64■□□□□ 0.42
NUP43Q8NFH3 KRT8P3-201ENST00000519669 1449 ntBASIC17.64■□□□□ 0.42
NUP43Q8NFH3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NUP43Q8NFH3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NUP43Q8NFH3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 AP000692.2-201ENST00000608391 879 ntBASIC17.64■□□□□ 0.41
NUP43Q8NFH3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 ANO7L1-203ENST00000602586 1720 ntBASIC17.64■□□□□ 0.41
NUP43Q8NFH3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NUP43Q8NFH3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 AC116562.2-201ENST00000507042 360 ntBASIC17.63■□□□□ 0.41
NUP43Q8NFH3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 HEIH-201ENST00000623091 1652 ntBASIC17.63■□□□□ 0.41
NUP43Q8NFH3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.63■□□□□ 0.41
NUP43Q8NFH3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.62■□□□□ 0.41
NUP43Q8NFH3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms