Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 CRYGFP-201ENST00000418459 633 ntBASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 SNORA78-201ENST00000459373 127 ntBASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 KRT17P2-201ENST00000300992 1314 ntBASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TMEM35BQ8NCS4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 UNC93B2-201ENST00000285383 730 ntBASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 AC068587.9-201ENST00000641814 219 ntBASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM35BQ8NCS4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 RBM17P1-201ENST00000453646 1190 ntBASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 AP005242.2-201ENST00000580065 1175 ntBASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM35BQ8NCS4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM35BQ8NCS4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM35BQ8NCS4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.94■□□□□ 0.78
TMEM35BQ8NCS4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM35BQ8NCS4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM35BQ8NCS4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM35BQ8NCS4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM35BQ8NCS4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms