Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LSMEM1Q8N8F7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LSMEM1Q8N8F7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSMEM1Q8N8F7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSMEM1Q8N8F7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSMEM1Q8N8F7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSMEM1Q8N8F7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.27■□□□□ 0.36
LSMEM1Q8N8F7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSMEM1Q8N8F7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSMEM1Q8N8F7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSMEM1Q8N8F7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.27■□□□□ 0.35
LSMEM1Q8N8F7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LSMEM1Q8N8F7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LSMEM1Q8N8F7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
LSMEM1Q8N8F7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LSMEM1Q8N8F7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.27■□□□□ 0.35
LSMEM1Q8N8F7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 KRT18P29-201ENST00000397031 1267 ntBASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 AC130371.2-201ENST00000619443 611 ntBASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 CR392000.1-201ENST00000624770 1228 ntBASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 ANO7L1-203ENST00000602586 1720 ntBASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 WIZP1-201ENST00000531444 2299 ntBASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSMEM1Q8N8F7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 KRT8P3-201ENST00000519669 1449 ntBASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 AL135905.2-201ENST00000584934 1404 ntBASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 TSPY20P-201ENST00000450910 630 ntBASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 FAM197Y4-202ENST00000622692 608 ntBASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 HEIH-201ENST00000623091 1652 ntBASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 AC007613.1-201ENST00000572811 2597 ntBASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.25■□□□□ 0.35
LSMEM1Q8N8F7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms