Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 AC141586.3-201ENST00000562166 1838 ntBASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC33Q8N5R6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 AC020763.4-201ENST00000623414 4170 ntBASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 MFAP1P1-201ENST00000442257 1255 ntBASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 FAM207BP-201ENST00000447172 505 ntBASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CCDC33Q8N5R6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.77■□□□□ 0.75
CCDC33Q8N5R6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.75
CCDC33Q8N5R6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 AK4P3-201ENST00000418260 669 ntBASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 AL160286.2-201ENST00000567150 934 ntBASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC33Q8N5R6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC33Q8N5R6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC33Q8N5R6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms