Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST3H2BBQ8N257 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 FER1L4-210ENST00000615531 5998 ntBASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 TPT1-202ENST00000379055 948 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 AC019171.1-201ENST00000601251 1056 ntBASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST3H2BBQ8N257 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST3H2BBQ8N257 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms