Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 HCG11-201ENST00000411553 5696 ntBASIC20.42■□□□□ 0.86
VPS52Q8N1B4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS52Q8N1B4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 AC116407.4-201ENST00000623319 1061 ntBASIC20.41■□□□□ 0.86
VPS52Q8N1B4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS52Q8N1B4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.4■□□□□ 0.86
VPS52Q8N1B4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 KRT126P-201ENST00000549467 1181 ntBASIC20.4■□□□□ 0.86
VPS52Q8N1B4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS52Q8N1B4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
VPS52Q8N1B4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VPS52Q8N1B4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VPS52Q8N1B4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VPS52Q8N1B4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 KRT18P48-201ENST00000434763 852 ntBASIC20.39■□□□□ 0.85
VPS52Q8N1B4 AC112907.2-201ENST00000448639 330 ntBASIC20.39■□□□□ 0.85
VPS52Q8N1B4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 NEK4P2-201ENST00000580004 1012 ntBASIC20.39■□□□□ 0.85
VPS52Q8N1B4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
VPS52Q8N1B4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms