Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC26.18■■□□□ 1.78
XRN1Q8IZH2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
XRN1Q8IZH2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC26.17■■□□□ 1.78
XRN1Q8IZH2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 KRT18P58-201ENST00000527480 1120 ntBASIC26.16■■□□□ 1.78
XRN1Q8IZH2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 ABR-217ENST00000572441 563 ntTSL 4 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC26.16■■□□□ 1.78
XRN1Q8IZH2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 AC124864.1-201ENST00000623408 392 ntBASIC26.15■■□□□ 1.78
XRN1Q8IZH2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
XRN1Q8IZH2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
XRN1Q8IZH2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
XRN1Q8IZH2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
XRN1Q8IZH2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC26.14■■□□□ 1.78
XRN1Q8IZH2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
XRN1Q8IZH2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC26.14■■□□□ 1.78
XRN1Q8IZH2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
XRN1Q8IZH2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC26.14■■□□□ 1.77
XRN1Q8IZH2 AC005336.2-201ENST00000593183 939 ntBASIC26.14■■□□□ 1.77
XRN1Q8IZH2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 MED22-202ENST00000371999 987 ntTSL 3 BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 AL031284.1-201ENST00000419297 478 ntBASIC26.13■■□□□ 1.77
XRN1Q8IZH2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 AC024563.2-201ENST00000603282 481 ntBASIC26.13■■□□□ 1.77
XRN1Q8IZH2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 AC007375.3-201ENST00000600936 2314 ntBASIC26.13■■□□□ 1.77
XRN1Q8IZH2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
XRN1Q8IZH2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
XRN1Q8IZH2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
XRN1Q8IZH2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
XRN1Q8IZH2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
XRN1Q8IZH2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC26.12■■□□□ 1.77
XRN1Q8IZH2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC26.12■■□□□ 1.77
XRN1Q8IZH2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
XRN1Q8IZH2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms