Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CCDC146Q8IYE0 BX323043.1-201ENST00000641006 1765 ntBASIC24.97■■□□□ 1.59
CCDC146Q8IYE0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC24.97■■□□□ 1.59
CCDC146Q8IYE0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.97■■□□□ 1.59
CCDC146Q8IYE0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CCDC146Q8IYE0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 KRT8P32-201ENST00000512863 1461 ntBASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 CCR12P-201ENST00000446203 998 ntBASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 AC008556.1-201ENST00000610908 2040 ntBASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC146Q8IYE0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
CCDC146Q8IYE0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CCDC146Q8IYE0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 TSPY17P-201ENST00000450329 467 ntBASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 AC097493.4-201ENST00000641197 219 ntBASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 AC068587.9-201ENST00000641814 219 ntBASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC146Q8IYE0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 MTMR9LP-203ENST00000426597 1545 ntBASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 KRT8P45-201ENST00000414328 1447 ntBASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC146Q8IYE0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 AC083906.6-201ENST00000641366 219 ntBASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 HEIH-201ENST00000623091 1652 ntBASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC146Q8IYE0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 AC036111.1-201ENST00000533973 1582 ntBASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC24.92■■□□□ 1.58
CCDC146Q8IYE0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC146Q8IYE0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms