Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM48Q8IWZ4 AC073508.3-201ENST00000619697 1419 ntBASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM48Q8IWZ4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 BX664615.1-201ENST00000443558 458 ntBASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM48Q8IWZ4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRIM48Q8IWZ4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms