Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 AC067852.2-201ENST00000590513 2313 ntBASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUDCD3Q8IVD9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 DUSP5P2-201ENST00000426873 1033 ntBASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUDCD3Q8IVD9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 TSPY21P-201ENST00000433481 731 ntBASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 AL050303.2-201ENST00000619798 666 ntBASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 AL162741.1-201ENST00000565563 1558 ntBASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUDCD3Q8IVD9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 282.5 ms