Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RAB43Q86YS6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB43Q86YS6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 AC092338.2-201ENST00000568827 1415 ntBASIC17.98■□□□□ 0.47
RAB43Q86YS6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 AL512408.1-201ENST00000569378 2000 ntBASIC17.98■□□□□ 0.47
RAB43Q86YS6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 AC022616.7-201ENST00000525383 220 ntBASIC17.98■□□□□ 0.47
RAB43Q86YS6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 WWOX-216ENST00000569818 525 ntBASIC17.98■□□□□ 0.47
RAB43Q86YS6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAB43Q86YS6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB43Q86YS6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 CKBP1-201ENST00000565489 1086 ntBASIC17.97■□□□□ 0.47
RAB43Q86YS6 AL353719.1-201ENST00000566847 864 ntBASIC17.97■□□□□ 0.47
RAB43Q86YS6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB43Q86YS6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB43Q86YS6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 RNF152P1-201ENST00000397754 604 ntBASIC17.96■□□□□ 0.47
RAB43Q86YS6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 AC117947.1-201ENST00000427448 529 ntBASIC17.96■□□□□ 0.47
RAB43Q86YS6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 COX11P1-201ENST00000489116 835 ntBASIC17.96■□□□□ 0.47
RAB43Q86YS6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 AL023803.3-201ENST00000615559 522 ntBASIC17.96■□□□□ 0.47
RAB43Q86YS6 AL138966.2-201ENST00000621997 464 ntBASIC17.96■□□□□ 0.47
RAB43Q86YS6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.96■□□□□ 0.47
RAB43Q86YS6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB43Q86YS6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms