Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C2orf69P3-201ENST00000565542 1120 ntBASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 AC133561.5-201ENST00000635547 218 ntBASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD3Q7Z3D4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 KRT8P3-201ENST00000519669 1449 ntBASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 CA15P1-201ENST00000481698 905 ntBASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD3Q7Z3D4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 AL023803.3-201ENST00000615559 522 ntBASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD3Q7Z3D4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 TSPY14P-201ENST00000303979 915 ntBASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 INGX-201ENST00000359239 846 ntBASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 AC008622.2-201ENST00000617006 1229 ntBASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 AC097493.4-201ENST00000641197 219 ntBASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD3Q7Z3D4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms