Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SHFQ7M4L6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHFQ7M4L6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 AC126763.1-201ENST00000552015 2118 ntBASIC17.05■□□□□ 0.32
SHFQ7M4L6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 TUBB8P6-201ENST00000436895 1288 ntBASIC17.05■□□□□ 0.32
SHFQ7M4L6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 KRT18P16-201ENST00000510337 1294 ntBASIC17.05■□□□□ 0.32
SHFQ7M4L6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 AL138781.1-201ENST00000566567 1274 ntBASIC17.05■□□□□ 0.32
SHFQ7M4L6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.05■□□□□ 0.32
SHFQ7M4L6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHFQ7M4L6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.04■□□□□ 0.32
SHFQ7M4L6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHFQ7M4L6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SHFQ7M4L6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 AC083906.6-201ENST00000641366 219 ntBASIC17.03■□□□□ 0.32
SHFQ7M4L6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms