Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 MIR4674-201ENST00000582457 87 ntBASIC18.08■□□□□ 0.48
RNF44Q7L0R7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 AC008622.2-201ENST00000617006 1229 ntBASIC18.08■□□□□ 0.48
RNF44Q7L0R7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF44Q7L0R7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 TERF1P1-201ENST00000311003 1181 ntBASIC18.07■□□□□ 0.48
RNF44Q7L0R7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 AC020763.4-201ENST00000623414 4170 ntBASIC18.07■□□□□ 0.48
RNF44Q7L0R7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.07■□□□□ 0.48
RNF44Q7L0R7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF44Q7L0R7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 AC005521.1-201ENST00000393351 872 ntBASIC18.06■□□□□ 0.48
RNF44Q7L0R7 RCN1P1-201ENST00000400413 996 ntBASIC18.06■□□□□ 0.48
RNF44Q7L0R7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF44Q7L0R7 AL161938.1-201ENST00000569833 2180 ntBASIC18.06■□□□□ 0.48
RNF44Q7L0R7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 AC010203.1-204ENST00000548782 407 ntBASIC18.05■□□□□ 0.48
RNF44Q7L0R7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 AC073508.3-201ENST00000619697 1419 ntBASIC18.05■□□□□ 0.48
RNF44Q7L0R7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF44Q7L0R7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF44Q7L0R7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms