Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HIST2H3AQ71DI3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 KRT8P3-201ENST00000519669 1449 ntBASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 RPS2P55-201ENST00000397318 883 ntBASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 AC107956.1-201ENST00000494359 873 ntBASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 CKBP1-201ENST00000565489 1086 ntBASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST2H3AQ71DI3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 FSCN1P1-201ENST00000568912 1481 ntBASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 FAM197Y1-201ENST00000421178 764 ntBASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 AC012618.2-201ENST00000428058 849 ntBASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 CD177P1-201ENST00000606252 935 ntBASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HIST2H3AQ71DI3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 AL158047.1-201ENST00000445918 881 ntBASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 FAM207BP-201ENST00000447172 505 ntBASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 AC116562.2-201ENST00000507042 360 ntBASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 AP000692.2-201ENST00000608391 879 ntBASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST2H3AQ71DI3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST2H3AQ71DI3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H3AQ71DI3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HIST2H3AQ71DI3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST2H3AQ71DI3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST2H3AQ71DI3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms