Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
USP50Q70EL3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP50Q70EL3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP50Q70EL3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
USP50Q70EL3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
USP50Q70EL3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.24■■□□□ 1.15
USP50Q70EL3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
USP50Q70EL3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.24■■□□□ 1.15
USP50Q70EL3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 MIR564-202ENST00000385049 94 ntBASIC22.24■■□□□ 1.15
USP50Q70EL3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.24■■□□□ 1.15
USP50Q70EL3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.24■■□□□ 1.15
USP50Q70EL3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.24■■□□□ 1.15
USP50Q70EL3 AL049840.3-201ENST00000602669 611 ntBASIC22.24■■□□□ 1.15
USP50Q70EL3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.24■■□□□ 1.15
USP50Q70EL3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
USP50Q70EL3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USP50Q70EL3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
USP50Q70EL3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
USP50Q70EL3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
USP50Q70EL3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
USP50Q70EL3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.23■■□□□ 1.15
USP50Q70EL3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.23■■□□□ 1.15
USP50Q70EL3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.23■■□□□ 1.15
USP50Q70EL3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
USP50Q70EL3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.23■■□□□ 1.15
USP50Q70EL3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.23■■□□□ 1.15
USP50Q70EL3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.23■■□□□ 1.15
USP50Q70EL3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.23■■□□□ 1.15
USP50Q70EL3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
USP50Q70EL3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
USP50Q70EL3 AL512353.2-201ENST00000448759 1962 ntBASIC22.23■■□□□ 1.15
USP50Q70EL3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
USP50Q70EL3 KRT89P-201ENST00000620027 1478 ntBASIC22.22■■□□□ 1.15
USP50Q70EL3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
USP50Q70EL3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USP50Q70EL3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.22■■□□□ 1.15
USP50Q70EL3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.22■■□□□ 1.15
USP50Q70EL3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.22■■□□□ 1.15
USP50Q70EL3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
USP50Q70EL3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USP50Q70EL3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USP50Q70EL3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
USP50Q70EL3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
USP50Q70EL3 FAM215A-202ENST00000632077 792 ntBASIC22.22■■□□□ 1.15
USP50Q70EL3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
USP50Q70EL3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USP50Q70EL3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USP50Q70EL3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.22■■□□□ 1.15
USP50Q70EL3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.21■■□□□ 1.15
USP50Q70EL3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.21■■□□□ 1.15
USP50Q70EL3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.21■■□□□ 1.15
USP50Q70EL3 AC132008.2-207ENST00000454517 770 ntBASIC22.21■■□□□ 1.15
USP50Q70EL3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.21■■□□□ 1.15
USP50Q70EL3 PGAM5P1-201ENST00000518923 814 ntBASIC22.21■■□□□ 1.15
USP50Q70EL3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 LINC02084-201ENST00000606069 1096 ntBASIC22.21■■□□□ 1.15
USP50Q70EL3 AL355385.1-201ENST00000606123 409 ntBASIC22.21■■□□□ 1.15
USP50Q70EL3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 AC055717.3-201ENST00000622967 595 ntBASIC22.21■■□□□ 1.15
USP50Q70EL3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USP50Q70EL3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.21■■□□□ 1.15
USP50Q70EL3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
USP50Q70EL3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.21■■□□□ 1.15
USP50Q70EL3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
USP50Q70EL3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
USP50Q70EL3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
USP50Q70EL3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
USP50Q70EL3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
USP50Q70EL3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
USP50Q70EL3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
USP50Q70EL3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.2■■□□□ 1.14
USP50Q70EL3 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.2■■□□□ 1.14
USP50Q70EL3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22.2■■□□□ 1.14
USP50Q70EL3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.2■■□□□ 1.14
USP50Q70EL3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.2■■□□□ 1.14
USP50Q70EL3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.2■■□□□ 1.14
USP50Q70EL3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.2■■□□□ 1.14
USP50Q70EL3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.2■■□□□ 1.14
USP50Q70EL3 AL139424.1-201ENST00000607572 797 ntBASIC22.2■■□□□ 1.14
USP50Q70EL3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC22.2■■□□□ 1.14
USP50Q70EL3 AC114341.1-201ENST00000618070 349 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms