Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 AC024243.1-201ENST00000609234 778 ntBASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 FP475955.4-201ENST00000623131 1990 ntBASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DCLRE1AQ6PJP8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.14■□□□□ 0.82
DCLRE1AQ6PJP8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
DCLRE1AQ6PJP8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 RCC2P3-201ENST00000418112 1537 ntBASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 LINC01311-201ENST00000565162 1445 ntBASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 ZNF444P1-201ENST00000559497 298 ntBASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DCLRE1AQ6PJP8 AC007952.6-201ENST00000573168 2673 ntBASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 AC003957.1-201ENST00000625108 2673 ntBASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 IER3-202ENST00000376377 1350 ntBASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 AC005332.1-201ENST00000577698 1310 ntBASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 KRT18P48-201ENST00000434763 852 ntBASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 RASA4DP-201ENST00000460726 1199 ntBASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DCLRE1AQ6PJP8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 AC083849.1-201ENST00000615227 514 ntBASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 AC116407.4-201ENST00000623319 1061 ntBASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 AC112497.1-201ENST00000624824 639 ntBASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.12■□□□□ 0.81
DCLRE1AQ6PJP8 KRT8P32-201ENST00000512863 1461 ntBASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DCLRE1AQ6PJP8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms