Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXR1Q6PIV2 AC009237.14-201ENST00000609975 1594 ntBASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 AC011270.2-201ENST00000624293 2550 ntBASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 AC211429.1-201ENST00000415277 523 ntBASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FOXR1Q6PIV2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXR1Q6PIV2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms