Protein–RNA interactions for Protein: Q6AI14

SLC9A4, Sodium/hydrogen exchanger 4, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A4Q6AI14 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 REXO1L10P-201ENST00000615707 1290 ntBASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 REXO1L12P-201ENST00000622156 912 ntBASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 AC090164.3-201ENST00000610780 2143 ntBASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SLC9A4Q6AI14 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC9A4Q6AI14 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC9A4Q6AI14 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC9A4Q6AI14 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC9A4Q6AI14 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A4Q6AI14 NEFHP1-201ENST00000412845 2629 ntBASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 TMEM191A-211ENST00000637163 1067 ntBASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A4Q6AI14 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 RCC2P3-201ENST00000418112 1537 ntBASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 MFAP1P1-201ENST00000442257 1255 ntBASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 AC026471.5-201ENST00000615068 467 ntBASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A4Q6AI14 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC9A4Q6AI14 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms