Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LPCAT4Q643R3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 AD000864.1-201ENST00000624076 2295 ntBASIC17.79■□□□□ 0.44
LPCAT4Q643R3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 AC110285.6-201ENST00000617652 491 ntBASIC17.79■□□□□ 0.44
LPCAT4Q643R3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.79■□□□□ 0.44
LPCAT4Q643R3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
LPCAT4Q643R3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 MFSD11-216ENST00000590393 1141 ntBASIC17.78■□□□□ 0.44
LPCAT4Q643R3 AL136967.2-201ENST00000623968 743 ntBASIC17.78■□□□□ 0.44
LPCAT4Q643R3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LPCAT4Q643R3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.77■□□□□ 0.44
LPCAT4Q643R3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 AC016405.3-201ENST00000607710 860 ntBASIC17.77■□□□□ 0.44
LPCAT4Q643R3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LPCAT4Q643R3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.77■□□□□ 0.43
LPCAT4Q643R3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
LPCAT4Q643R3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LPCAT4Q643R3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LPCAT4Q643R3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LPCAT4Q643R3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LPCAT4Q643R3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LPCAT4Q643R3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LPCAT4Q643R3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 AC023632.3-201ENST00000521633 145 ntBASIC17.76■□□□□ 0.43
LPCAT4Q643R3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 AL591742.1-201ENST00000604433 565 ntBASIC17.76■□□□□ 0.43
LPCAT4Q643R3 AC105020.6-201ENST00000621523 1217 ntBASIC17.76■□□□□ 0.43
LPCAT4Q643R3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms