Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.59■□□□□ 0.73
LRRC38Q5VT99 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 AP000692.2-201ENST00000608391 879 ntBASIC19.59■□□□□ 0.73
LRRC38Q5VT99 FAM197Y4-202ENST00000622692 608 ntBASIC19.59■□□□□ 0.73
LRRC38Q5VT99 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 MYC-208ENST00000641036 567 ntBASIC19.59■□□□□ 0.73
LRRC38Q5VT99 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC38Q5VT99 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC38Q5VT99 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC38Q5VT99 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.58■□□□□ 0.73
LRRC38Q5VT99 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC38Q5VT99 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC38Q5VT99 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.58■□□□□ 0.73
LRRC38Q5VT99 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC38Q5VT99 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRRC38Q5VT99 KRT18P29-201ENST00000397031 1267 ntBASIC19.58■□□□□ 0.72
LRRC38Q5VT99 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRRC38Q5VT99 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 AC126763.1-201ENST00000552015 2118 ntBASIC19.57■□□□□ 0.72
LRRC38Q5VT99 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 AL357033.4-201ENST00000617703 1807 ntBASIC19.57■□□□□ 0.72
LRRC38Q5VT99 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 AC112777.1-201ENST00000540175 1423 ntBASIC19.57■□□□□ 0.72
LRRC38Q5VT99 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRC38Q5VT99 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 AL354751.1-201ENST00000412768 1863 ntBASIC19.56■□□□□ 0.72
LRRC38Q5VT99 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 AL390961.4-201ENST00000623958 2535 ntBASIC19.56■□□□□ 0.72
LRRC38Q5VT99 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC38Q5VT99 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms