Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSL3PQ5NE16 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTSL3PQ5NE16 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTSL3PQ5NE16 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.58■□□□□ 0.57
CTSL3PQ5NE16 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 UNC93B2-201ENST00000285383 730 ntBASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 AL390955.1-201ENST00000428694 934 ntBASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 TSPY15P-201ENST00000457163 923 ntBASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 MIR4497-201ENST00000583208 89 ntBASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 RNF165-205ENST00000588679 2904 ntBASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CTSL3PQ5NE16 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTSL3PQ5NE16 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CTSL3PQ5NE16 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 AC104581.1-202ENST00000635932 2618 ntBASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 AL499627.1-201ENST00000569373 2188 ntBASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 FITM1-202ENST00000559294 800 ntBASIC18.55■□□□□ 0.56
CTSL3PQ5NE16 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms