Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH1Q08174 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PCDH1Q08174 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDH1Q08174 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH1Q08174 HCG11-201ENST00000411553 5696 ntBASIC18.2■□□□□ 0.5
PCDH1Q08174 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH1Q08174 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH1Q08174 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDH1Q08174 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDH1Q08174 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDH1Q08174 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH1Q08174 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH1Q08174 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH1Q08174 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDH1Q08174 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDH1Q08174 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH1Q08174 Z99916.2-201ENST00000604037 246 ntBASIC18.18■□□□□ 0.5
PCDH1Q08174 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDH1Q08174 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH1Q08174 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDH1Q08174 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDH1Q08174 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH1Q08174 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH1Q08174 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDH1Q08174 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 MTMR9LP-203ENST00000426597 1545 ntBASIC18.18■□□□□ 0.5
PCDH1Q08174 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH1Q08174 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH1Q08174 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH1Q08174 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH1Q08174 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH1Q08174 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH1Q08174 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDH1Q08174 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH1Q08174 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDH1Q08174 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH1Q08174 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH1Q08174 CA15P1-201ENST00000481698 905 ntBASIC18.17■□□□□ 0.5
PCDH1Q08174 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH1Q08174 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH1Q08174 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.17■□□□□ 0.5
PCDH1Q08174 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH1Q08174 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH1Q08174 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH1Q08174 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDH1Q08174 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDH1Q08174 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH1Q08174 ANO7L1-203ENST00000602586 1720 ntBASIC18.17■□□□□ 0.5
PCDH1Q08174 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH1Q08174 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDH1Q08174 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH1Q08174 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH1Q08174 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH1Q08174 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH1Q08174 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH1Q08174 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDH1Q08174 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH1Q08174 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
PCDH1Q08174 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH1Q08174 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PCDH1Q08174 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH1Q08174 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH1Q08174 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH1Q08174 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH1Q08174 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH1Q08174 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms