Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL121772.3-201ENST00000610840 674 ntBASIC17.92■□□□□ 0.46
GABREP78334 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
GABREP78334 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
GABREP78334 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GABREP78334 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
GABREP78334 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GABREP78334 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.91■□□□□ 0.46
GABREP78334 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
GABREP78334 HLA-F-220ENST00000434407 884 ntBASIC17.91■□□□□ 0.46
GABREP78334 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.91■□□□□ 0.46
GABREP78334 SEC1P-202ENST00000473944 940 ntBASIC17.91■□□□□ 0.46
GABREP78334 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.91■□□□□ 0.46
GABREP78334 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.91■□□□□ 0.46
GABREP78334 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.91■□□□□ 0.46
GABREP78334 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.91■□□□□ 0.46
GABREP78334 GPALPP1-207ENST00000611650 899 ntBASIC17.91■□□□□ 0.46
GABREP78334 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.91■□□□□ 0.46
GABREP78334 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GABREP78334 AL157888.1-201ENST00000631930 593 ntBASIC17.91■□□□□ 0.46
GABREP78334 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.91■□□□□ 0.46
GABREP78334 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.91■□□□□ 0.46
GABREP78334 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.91■□□□□ 0.46
GABREP78334 AL512408.1-201ENST00000569378 2000 ntBASIC17.91■□□□□ 0.46
GABREP78334 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.91■□□□□ 0.46
GABREP78334 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GABREP78334 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.91■□□□□ 0.46
GABREP78334 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GABREP78334 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
GABREP78334 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GABREP78334 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GABREP78334 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.9■□□□□ 0.46
GABREP78334 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.9■□□□□ 0.46
GABREP78334 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GABREP78334 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.9■□□□□ 0.46
GABREP78334 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GABREP78334 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.9■□□□□ 0.46
GABREP78334 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.9■□□□□ 0.46
GABREP78334 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.9■□□□□ 0.46
GABREP78334 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.9■□□□□ 0.46
GABREP78334 AC023511.2-201ENST00000618803 211 ntBASIC17.9■□□□□ 0.46
GABREP78334 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GABREP78334 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.9■□□□□ 0.46
GABREP78334 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GABREP78334 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.9■□□□□ 0.46
GABREP78334 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.9■□□□□ 0.46
GABREP78334 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.89■□□□□ 0.46
GABREP78334 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
GABREP78334 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
GABREP78334 ZNF815P-204ENST00000434898 1737 ntBASIC17.89■□□□□ 0.46
GABREP78334 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.89■□□□□ 0.45
GABREP78334 AL162377.1-201ENST00000618844 1793 ntBASIC17.89■□□□□ 0.45
GABREP78334 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
GABREP78334 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms