Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
AP3S2P59780 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.21■□□□□ 0.18
AP3S2P59780 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
AP3S2P59780 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
AP3S2P59780 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP3S2P59780 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
AP3S2P59780 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
AP3S2P59780 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
AP3S2P59780 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3S2P59780 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3S2P59780 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
AP3S2P59780 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3S2P59780 PBX2P1-201ENST00000493219 1291 ntBASIC16.2■□□□□ 0.18
AP3S2P59780 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.2■□□□□ 0.18
AP3S2P59780 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 AF213884.3-201ENST00000563833 479 ntBASIC16.2■□□□□ 0.18
AP3S2P59780 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.2■□□□□ 0.18
AP3S2P59780 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3S2P59780 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 AC009053.2-201ENST00000563701 2365 ntBASIC16.2■□□□□ 0.18
AP3S2P59780 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S2P59780 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3S2P59780 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
AP3S2P59780 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
AP3S2P59780 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
AP3S2P59780 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S2P59780 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
AP3S2P59780 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP3S2P59780 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
AP3S2P59780 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
AP3S2P59780 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP3S2P59780 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 TERF1P2-201ENST00000583350 1212 ntBASIC16.19■□□□□ 0.18
AP3S2P59780 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
AP3S2P59780 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S2P59780 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S2P59780 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S2P59780 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP3S2P59780 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S2P59780 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
AP3S2P59780 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.18■□□□□ 0.18
AP3S2P59780 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.18■□□□□ 0.18
AP3S2P59780 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.18■□□□□ 0.18
AP3S2P59780 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
AP3S2P59780 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.18■□□□□ 0.18
AP3S2P59780 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
AP3S2P59780 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
AP3S2P59780 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
AP3S2P59780 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.18■□□□□ 0.18
AP3S2P59780 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.18■□□□□ 0.18
AP3S2P59780 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
AP3S2P59780 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.18■□□□□ 0.18
AP3S2P59780 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.18■□□□□ 0.18
AP3S2P59780 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
AP3S2P59780 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S2P59780 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.18■□□□□ 0.18
AP3S2P59780 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.18■□□□□ 0.18
AP3S2P59780 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms