Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC097488.1-201ENST00000507834 756 ntBASIC17.29■□□□□ 0.36
CLDN20P56880 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN20P56880 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN20P56880 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN20P56880 SLC25A1P4-201ENST00000567977 778 ntBASIC17.29■□□□□ 0.36
CLDN20P56880 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN20P56880 AP000692.2-201ENST00000608391 879 ntBASIC17.29■□□□□ 0.36
CLDN20P56880 DGCR10-201ENST00000609839 495 ntBASIC17.29■□□□□ 0.36
CLDN20P56880 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN20P56880 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN20P56880 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN20P56880 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 KRT8P9-201ENST00000558927 1449 ntBASIC17.29■□□□□ 0.36
CLDN20P56880 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN20P56880 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN20P56880 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN20P56880 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN20P56880 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN20P56880 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CLDN20P56880 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN20P56880 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 AL032819.2-201ENST00000624543 2162 ntBASIC17.28■□□□□ 0.36
CLDN20P56880 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLDN20P56880 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN20P56880 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN20P56880 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN20P56880 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN20P56880 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN20P56880 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN20P56880 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN20P56880 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CLDN20P56880 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLDN20P56880 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN20P56880 PCDHB18P-201ENST00000524813 2368 ntBASIC17.27■□□□□ 0.36
CLDN20P56880 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLDN20P56880 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN20P56880 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN20P56880 CRYGFP-201ENST00000418459 633 ntBASIC17.27■□□□□ 0.36
CLDN20P56880 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CLDN20P56880 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN20P56880 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN20P56880 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN20P56880 FITM1-202ENST00000559294 800 ntBASIC17.27■□□□□ 0.36
CLDN20P56880 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN20P56880 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.27■□□□□ 0.36
CLDN20P56880 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN20P56880 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN20P56880 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN20P56880 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN20P56880 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN20P56880 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN20P56880 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN20P56880 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN20P56880 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.27■□□□□ 0.35
CLDN20P56880 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN20P56880 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN20P56880 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN20P56880 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
CLDN20P56880 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN20P56880 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN20P56880 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLDN20P56880 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN20P56880 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN20P56880 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLDN20P56880 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN20P56880 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms