Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
AP1S2P56377 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
AP1S2P56377 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.36■□□□□ 0.53
AP1S2P56377 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.36■□□□□ 0.53
AP1S2P56377 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.36■□□□□ 0.53
AP1S2P56377 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.36■□□□□ 0.53
AP1S2P56377 CA15P1-201ENST00000481698 905 ntBASIC18.36■□□□□ 0.53
AP1S2P56377 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.36■□□□□ 0.53
AP1S2P56377 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.36■□□□□ 0.53
AP1S2P56377 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.36■□□□□ 0.53
AP1S2P56377 AP005242.2-201ENST00000580065 1175 ntBASIC18.36■□□□□ 0.53
AP1S2P56377 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.36■□□□□ 0.53
AP1S2P56377 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 AC068587.9-201ENST00000641814 219 ntBASIC18.36■□□□□ 0.53
AP1S2P56377 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP1S2P56377 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.35■□□□□ 0.53
AP1S2P56377 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.35■□□□□ 0.53
AP1S2P56377 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
AP1S2P56377 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.35■□□□□ 0.53
AP1S2P56377 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.35■□□□□ 0.53
AP1S2P56377 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.35■□□□□ 0.53
AP1S2P56377 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.35■□□□□ 0.53
AP1S2P56377 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AP1S2P56377 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.35■□□□□ 0.53
AP1S2P56377 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP1S2P56377 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.35■□□□□ 0.53
AP1S2P56377 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.34■□□□□ 0.53
AP1S2P56377 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.34■□□□□ 0.53
AP1S2P56377 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.34■□□□□ 0.53
AP1S2P56377 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.34■□□□□ 0.53
AP1S2P56377 KRT17P2-201ENST00000300992 1314 ntBASIC18.34■□□□□ 0.53
AP1S2P56377 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
AP1S2P56377 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
AP1S2P56377 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 UNC93B2-201ENST00000285383 730 ntBASIC18.34■□□□□ 0.53
AP1S2P56377 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.34■□□□□ 0.53
AP1S2P56377 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.34■□□□□ 0.53
AP1S2P56377 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.34■□□□□ 0.53
AP1S2P56377 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.34■□□□□ 0.53
AP1S2P56377 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP1S2P56377 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
AP1S2P56377 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S2P56377 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S2P56377 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
AP1S2P56377 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
AP1S2P56377 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S2P56377 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S2P56377 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
AP1S2P56377 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S2P56377 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.33■□□□□ 0.53
AP1S2P56377 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S2P56377 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.33■□□□□ 0.53
AP1S2P56377 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S2P56377 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AP1S2P56377 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.33■□□□□ 0.52
AP1S2P56377 ANO7L1-203ENST00000602586 1720 ntBASIC18.33■□□□□ 0.52
AP1S2P56377 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 TSPY7P-201ENST00000431358 1114 ntBASIC18.33■□□□□ 0.52
AP1S2P56377 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
AP1S2P56377 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.33■□□□□ 0.52
AP1S2P56377 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.33■□□□□ 0.52
AP1S2P56377 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.33■□□□□ 0.52
AP1S2P56377 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
AP1S2P56377 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
AP1S2P56377 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP1S2P56377 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
AP1S2P56377 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms